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macro_output-nd2-maxprojection-zstack.ijm

/*– * Script by J. Johnson. * Opens all nd2 or other multi channel files in a directory. This script will create a max projection of any input z-stack and save using bioformats import and export. Any file that is not a z-stack will save normally as the same file type. * Includes output as […]

ScrachEssay

//* //Caner Ercan //[email protected] //First Dialog Asks for the folder which contains all the images //Second dialog asks for time zero image //It generates a file in the same folder named as Results.csv *// setBatchMode(true); input = getDirectory(“Choose Image Directory”); //input + “C:/Users/Caner/Desktop/cedric/” filelist = getFileList(input) //Get all the images for (i = 0; i […]